Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827057.1_cds_XP_016502930.1_16520
CDS Infomation

[gene=LOC107821053] [db_xref=GeneID:107821053] [protein=probable protein phosphatase 2C 49] [protein_id=XP_016502930.1] [location=complement(join(21941..22936,23949..24059))] [gbkey=CDS]
Sequence

ATGATTGTGAAGAAGAGTTCAACGACGATGAATACGATGGTAGTTGTTGATGCCGAGATT
TTGAGCGTTTCTGTTGATTCGGTTTCCATTGATATTTCTCGTTCTGATTCGGGTGTGAGA
TGCTCAACTAGTACTCCGGCAACAATCATCGATTCAGCGAGAAGCAAATTTCTCCCATCT
ATTCGTTCGGGTAGCTACACTGATATTGGACCTCGTAGATCCAATGAAGATGAACACATT
CGTGTTGACGATCTTTCAGCTCAGTTGGGTTCTCTGTATAATTGGCCTCTTCCGGGCTCG
TTCTATGCTGTTTTCGATGGTCATGGGGGTTCTGATGCAGCTGCTTATGTCAGGACTAAC
TCAATGAGATTTTTCTTTGAAGATGCTGATTTGCCGCAAGCATCTGTTGTTGATCAGGAA
TTCATGGAAGAATTGGAGAGTTCTCACTGTAGAGCGTTCTTAAAAGCTGATCTTGCCTTG
GCGGATGAATGTAGTGTTAATGCCGCTTGTGGAACAACAGCAATAACTGCCCTGGTTTTG
GGAAGACATCTGGTTGTTGCTAATGCCGGTGATTGTCGTGCTGTCCTTTGTAGGAAAGGC
GTTGCAGTTCAGTTGTCTCAAGATCACAGGCCTACTTCTCTGGTGGAGCGACAAAGAGTT
GAGAACTTAGGCGGTATTATTGAATATGGCTTCCTAAATGGTGATCTTGCAGTTACCCGT
GCTCTTGGAGATTGGTATATGAAGCTTCCGTTCGGATCTGCATCTCCTCTTACTGCAGAA
CCAGAAGTCAAGCAGATGTTGTTGACTGAAGATGATGAGTTCATGATAATTGGTTGCGAT
GGCATTTGGGATGTGATGTCGAACCAAGAAGCAGTGAATGTTGTTCGCCGTGAGCTTAGG
CTACATAATGACCCGCAAGAGTCTGCTAAAGAACTTGTGAATCACGCTTTATGTAGGGAC
GTAGATGACAACCTCACTGCAATTGTTGTGTGCTTTACTAATCCTGATCATCAAGCTTCA
GTTCCATCCCAAAGGCCAAGATTCAGGTGTTGCAGTTTGTCCGAAGAGGCGAGGAAGAAG
CTGCAAAGTTTGTTAGGAAGCAATTGA

Peptide Sequence

PEP ID

XP_016502930.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 49 [Nicotiana tabacum]
Sequence

MIVKKSSTTMNTMVVVDAEILSVSVDSVSIDISRSDSGVRCSTSTPATIIDSARSKFLPS
IRSGSYTDIGPRRSNEDEHIRVDDLSAQLGSLYNWPLPGSFYAVFDGHGGSDAAAYVRTN
SMRFFFEDADLPQASVVDQEFMEELESSHCRAFLKADLALADECSVNAACGTTAITALVL
GRHLVVANAGDCRAVLCRKGVAVQLSQDHRPTSLVERQRVENLGGIIEYGFLNGDLAVTR
ALGDWYMKLPFGSASPLTAEPEVKQMLLTEDDEFMIIGCDGIWDVMSNQEAVNVVRRELR
LHNDPQESAKELVNHALCRDVDDNLTAIVVCFTNPDHQASVPSQRPRFRCCSLSEEARKK
LQSLLGSN

Transcript Sequence

Gene sequence data has not been registered.